PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do015233.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 199aa    MW: 21050.1 Da    PI: 10.6448
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do015233.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.55.2e-12102162262
                 XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                 ke  r +r+ +NR++A+  R+RKka++ eLe k+k Le  N +L +++++l++e  +l++ 
  Do015233.1 102 KEQNRLKRLLRNRVSAQQARERKKAYLTELEAKAKDLELRNAELEQRVSTLQNENNTLRQI 162
                 78899***************************************************99986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.0E-13101165IPR004827Basic-leucine zipper domain
PfamPF001702.5E-10102163IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.162103166IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-11106163No hitNo description
Gene3DG3DSA:1.20.5.1703.9E-16106165No hitNo description
CDDcd147047.71E-16106156No hitNo description
PROSITE patternPS000360108123IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MAAQEQEQEK QQAKSTTSSL PSSSERSSSS APNNLREGGV ESDEEIRRVP EMGGASASAS  60
SGAGADELPR EDGKQGQLVA MTGAQGQPPA AGKKRGRTAG DKEQNRLKRL LRNRVSAQQA  120
RERKKAYLTE LEAKAKDLEL RNAELEQRVS TLQNENNTLR QILKNTTAHA SKRSSGSGGA  180
GGKGGDGGGG GKKHHFTKS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180188GGKGGDGGG
2182191KGGDGGGGGK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0350880.0BT035088.1 Zea mays full-length cDNA clone ZM_BFb0038J16 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004968380.12e-84PREDICTED: transcription factor HY5-like
SwissprotQ9SM501e-44HY5_SOLLC; Transcription factor HY5
TrEMBLK3XM662e-84K3XM66_SETIT; Uncharacterized protein
STRINGSi002989m6e-84(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140838111
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.13e-37bZIP family protein